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Higher: Biology

Learning Cards for the entire SQA Higher Biology Course


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Higher: Biology


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[Front]


What type of molecule is DNA
[Back]


double stranded helix molecule

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What type of molecule is DNA
Double stranded helix molecule
What is DNA made up of
Repeating units called nucleotides
What is each nucleotide composed of?
A phosphate deoxyribose sugar a base
What is the base pairing in DNA
Adenine with Thymine Guanine and Cytosine
What is the backbone of each DNA strand produced (held together) by
Strong sugar-phosphate bonds bonds between the deoxyribose sugar and the phosphate in each nucleotide
Where on the deoxyribose sugar is a sugar phosphate bond formed
Between the 3' carbon of the deoxyribose sugar of one nucleotide and the phosphate of that nucleotide attached to the 5' carbon above or below it on the strand
What is the base pairing on DNA
Adenine - Thymine Cytosine - Guanine
Why is DNA described as an antiparallel structure?
Strands run in opposite directions One strand runs from 3' to 5' and the other runs from 5' to 3'
Give examples of eukaryotic cells
Animal cells plant cells fungal cells
Describe where DNA is found in eukaryotic cells
Eukaryotes have linear chromosomes in the nucleus which are tightly coiled and packaged with associated proteins called histones. They also contain circular chromosomes in their mitochondria and chloroplasts
Why is yeast a special example of a eukaryote
Yeast cells also have plasmids
Where is the DNA of prokaryotic cells found?
Their DNA is found in the cytoplasm of the cell as a single circular chromosome and smaller circular plasmids
What must take place prior to cell division?
DNA must be replicated exactly by DNA polymerase to ensure each daughter cell receives all the needed genetic information to carry out its activities and functions.
Describe the DNA replication process in vivo (living cells)
DNA is unwound and hydrogen bonds between bases are broken to form two template strands The enzyme DNA polymerase needs primers to start replication. Primer allows DNA polymerase to add DNA nucleotides using complementary base pairing to the 3' deoxyribose end of the primer DNA polymerase can only add nucleotides in one direction (3' - 5') resulting in the leading strand being replicated continuously and the lagging strand being replicated in fragments. The fragments of DNA on the lagging strand are joined together by the enzyme ligase
What is a primer
A short strand of nucleotides which binds to the 3' end of the template DNA strand
What is PCR
Polymerase Chain Reaction An automated process that amplifies DNA using complementary primers for specific target sequences
What are practical applications of PCR
It can amplify DNA to help solve crimes, settle paternity suits and diagnose genetic disorders
What is a primer in PCR
Short strands of nucleotides which are complementary to specific target sequences at the two ends of the region of the DNA to be amplified
What happens (vaguely)during the PCR process
There are repeated cycles of heating and cooling to amplify the DNA each cycle doubles the number of DNA molecules that are present
Describe in detail each stage of the PCR process
Double stranded DNA is heated to between 92-98 degrees celcius to separate the DNA strands (completely) DNA is then cooled to between 50 and 65 degrees celcius to allow primers to bind to target sequences It is then heated to between 70 and 80 degrees celcius for head tolerant DNA polymerase to replicate the region of DNA
What does Gene expression involve
The transcription and translation of DNA sequences so that proteins can be made
Do all of the genes in a cell code for making a protein?
No only a fraction of the genes in a cell are expressed
What three types of ribonucleic acid (RNA) do transcription and translation involve?
Messenger RNA (mRNA) transfer RNA (tRNA) ribosomal RNA (rRNA)
What is RNA
A single stranded molecule composed of RNA nucleotides containing ribose sugar, phosphate and one of four bases, C, G, A, U
Name the four bases found on an RNA molecule
Adenine uracil cytosine guanine
What is the function of mRNA
Carries a copy of the DNA code from the nucleus to the ribsome. it is trascribed from DNA in the nucleus and translated into proteins by ribosomes in the cytoplasm
What is each triplet of bases on an mRNA molecule called
A codon a codon codes for a specific amino acid
Describe the structure of a tRNA molecule
They fold due to complementary base pairing they have an anticodon at one end and an amino acid attachment site for a specific amino acid at the other end
What is the function of tRNA
They carry their specific amino acid to the ribosome
What is an anticodon
An exposed triplet of bases
What is the function of rRNA
Forms the ribosome alongside proteins
What is transcription
The first step in protein synthesis when information from DNA is copied into an RNA molecule, a processs which takes place in the nucleus
Describe the transcription process
Transcription begins when RNA polymerase moves along DNA unwinding the double helix and breaking the hydrogen bonds between the bases free RNA nucleotides are attracted to the exposed DNA bases RNA polymerase synthesises a primary transcript of mRNA from RNA nucleotides by complementary base pairing. When the mRNA primary transcript is complete it breaks away from the DNA molecule which rewinds into its double helix again
What happens after a eukaryotic cell transcribes a protein coding gene in the nucleus
The primary mRNA transcript is processed by a process called RNA splicing
What does RNA splicing form
A mature mRNA transcript
What happens during rNA splicing
The introns of the primary transcript are removed as they are non coding regions the exons are joined together to form the mature transcript as they are coding regions the order of the exons are unchanged during splicing
Describe the process of translation
TrNA is involved in the translation of mRNA into a polypeptide at a ribosome tRNA molecules carrying a specific amino acid attached to the amino acid attachment site arrives at the ribosome translation begins at a start codon and ends at a stop codon anticodons bond to codons by complementary base pairing, translating the genetic code into a sequence of amino acids peptide bonds join the amino acids together Each tRNA then leaves the ribosome as the polypeptide is formed
Why can many different proteins be expressed from one gene
As a result of alternative RNA splicing different mature transcripts can be produced from the same primary transcript depending on which exons are retained
How are polypeptides formed from amino acids
By being linked together by peptide bonds
How do polypeptides become proteins
Polypeptide chains fold to form the three dimensional shape of a protein, held together by hydrogen bonds and other interactions between individual amino acids
What is cellular differentiation?
A process by which a cell expresses certain genes to produce proteins which are characteristic for that type of cell
What are stem cells?
Unspecialised animal cells that can divide to self renew and/or differentiate
What two types of stem cells are there
Embryonic - from an embryo Tissue (adult) stem cells - from tissues
Why are embryonic stem cells pluripotent?
Cells in the very early embryo can differentiate into all the cell types that make up the organism All the genes in embryonic stem cells can be switched on, so they can differentiate into any cell type
What are tissue stem cells involved in?
The growth, repair and renewal of cells found in that tissue
Why are tissue stem cells multipotent?
They can differentiate into all the types of cell found in a particular tissue type
Name some therapeutic uses of stem cells
The repair of damaged and diseased organs or tissues such as the repair of corneas - damaged by chemical attack regeneration of damaged skin, producing a skin graft for burn victims bone marrow transplant to treat patients with blood cancer, eg leukemia
What must happen to stem cells from the embryo in order to be used for therapeutic purposes?
They can self renew under the right conditions in the lab for these purposes
What does stem cell research provide information on?
How cell processes such as cell growth, differentiation and gene regulation work.
What do research uses of stem cells involve?
Stem cells being used as model cells to study how diseases develop stem cells being used for drug testing
Why is use of embryonic stem cells an ethical issue?
Stem cells can offer effective treatments for disease and injury, however it involves the destruction of embryos
Define meristems
Regions of unspecialised cells which can divide to self renew and/or differentiate into many cell types
What is a genome of an organism
The organisms entire hereditary information encoded in DNA
What is a genome made up of
Genes (DNA sequences that code for protein) and other DNA sequences that do not code for proteins.
What is the function of other dna sequences that do not code for proteins in our genome
They regulate (control) transcription (production of mRNA) others are transcribed but never translated (not used for making proteins)
What are mutations
Random changes in the DNA that can result in no protein or an altered protein being synthesised
What are single gene mutations
Involve the alteration of a DNA nucleotide sequence as a result of the substitution, insertion or deletion of nucleotides
What is a substitution mutation
Occurs when one base is substituted for another. substitutions result in a change that only affects one codon
Describe a missense substitution mutation
Missense mutations result in one amino acid being changed for another. This may result in a non-functional protein or have little effect on the protein
Describe a nonsense substitution mutation
Nonsense mutations result in a premature stop codon beng produced which results in a shorter protein
Describe a splice site mutation
When there is a substitution mutation at a splice site and then some introns may be retained and some exons may not be included in the mature transcript
Describe frame shift mutations
Insertions or deletions result in frame shift mutations frame shift mutations cause all of the codons and all of the amino acids after the mutation to be changed, having a major effect on the structure of the protein
Describe a deletion mutation
When a deletion mutation occurs, one (or several) bases is deleted from the DNA molecule
Describe an insertion mutation
When an insertion mutation occurs, one (or several) bases is inserted into the DNA molecule
Are frameshift mutations more are less dangerous than substitution mutations
They are more detrimental than substitution mutations the whole base sequence after the mutation is changed
What are chromosomal structure mutations
Involve the number or sequence of genes on a chromosome being altered
Name the four types of chromosome changes
Deletion duplication translocation inversion
Are chromosomal structure mutations dangerous
The substantial changes in chromosome mutations often make them lethal
Describe deletion chromosome mutation
Where a section of a chromosome is removed
Describe inversion chromosome mutation
Where a section of a chromosome is reversed
Describe translocation
Where a section of a chromosome is added to a chromosome, not its homologous partner
Describe duplication chromosome mutation
Where a section of a chromosome is added from its homologous partner
How can gene duplication be beneficial
Gene duplication allows potential beneficial mutations to occur in a duplicated gene whilst the original gene can still be expressed to produce its protein
What is evolution
Changes in organisms over generations as a result of genomic variations
What is natural selection
The non random increase in frequency of DNA sequences that increase survival and the non random reduction in the frequency of deleterious sequences
Why is natural selection non random
Only individuals with advantageous DNA sequences will survive (only a specific group survive, survivors are not picked randomly)
What are deleterious sequences
Harmful DNA base sequences
Describe the theory of natural selection
In each generation more offspring are produced than it is possible for the environment to support each individual in the offspring has to compete and struggle to survive in order to reproduce and pass on its genes every individual in a population displays slightly different phenotypes due to random mutations. The individuals that possess characteristics that are better adapted to their environment are most likely to survive these individuals have advantageous DNA sequences which are non randomly selected for The less beneficial DNA sequences are gradually removed from the population as individuals displaying these characteristics have a reduced survival rate and chance of reproducing. They have deleterious DNA sequences which are non randomly selected against.
What can be done to polygenic characteristics to display that they have continuous variation / normal distribution
They can be graphed and tend to show a bell shaped normal distribution this distribution indicates that there are fewer individuals with the more extreme measurement of the characteristic and many more with the average measurement of the characteristic
Describe stabilising selection
An average phenotype is selected for and extremes of the phenotype range are selected against
Describe directional selection
One extreme of the phenotype range is selected for
Describe disruptive selection
Two or more phenotypes are selected for
Describe vertical gene transfer
Genes are transferred from parent to offspring as a result of sexual or asexual reproduction
Describe horizontal gene transfer
Where genes are transferred between individuals in the same generation
Is natural selection slower or faster in prokaryotes
Natural selection is more rapid in prokaryotes as they can exchange genetic material horizontally, resulting in faster evolutionary change than in organisms that only use vertical transfer
What is a species
A group of organisms capable of interbreeding and producing fertile offspring, and which does not normally breed with other groups